Difference between revisions of "MediaWiki/Tags for Pop-up Models"

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(updates to Jmol MW Extension v5)
 
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Latest revision as of 18:21, 25 April 2019

Tags in the Jmol Extension for MediaWiki that will open models in a pop-up

These tags will write a link or button that, when clicked by the user, will open a small window (pop-up) with a JSmol panel that displays a structure. They accept more customization (e.g. scripts) than the simple tags.

The tags are sub-tags of the <jmol> tag and in turn include several sub-tags: see the full list documented for <jmolApplet> (but note that not all of them will make sense here)

The wikicode is displayed to the right of each example.

jmolAppletButton tag

Using pSpeed 8 to test high quality cartoons.

<jmol>
  <jmolAppletButton>
    <urlContents> https://files.rcsb.org/download/1ab0.pdb.gz </urlContents>
    <title> 1AB0.pdb Murine adipocyte lipid binding protein at pH 4.5</title>
    <text> Adipocyte lipid binding protein</text>
    <script>cartoon only</script>
    <pspeed>8</pspeed>
  </jmolAppletButton>
</jmol>

Testing accented characters, and pSpeed 2.

<jmol>
  <jmolAppletButton>
    <urlContents> https://files.rcsb.org/download/1ab0.pdb.gz </urlContents>
    <title> 1AB0.pdb Proteína de ratón ligante de lípidos, a pH 4.5</title>
    <text> Proteína ligante de lípidos </text>
    <pspeed>2</pspeed>
    <script> spin on </script>
    <caption> This is from 1AB0.pdb </caption>
  </jmolAppletButton>
</jmol>

jmolAppletLink tag

Adipocyte lipid binding protein

<jmol>
  <jmolAppletLink>
    <urlContents> https://files.rcsb.org/download/1ab0.pdb.gz </urlContents>
    <title> 1AB0.pdb Murine adipocyte lipid binding protein at pH 4.5</title>
    <text> Adipocyte lipid binding protein </text>
  </jmolAppletLink>
</jmol>


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Contributors

AngelHerraez