Difference between revisions of "Support/Android"

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(Jmol in Android)
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== Android Operating System (smartphones and tablets) ==
 
== Android Operating System (smartphones and tablets) ==
  
Jmol 12.3 is available in a special version for running under Android operating system.
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Jmol 12.3 is available in a special version for running in tablets under the Android operating system:
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'''Jmol Molecular Visualization Activity''', version 1.1, requires Android 2.2 or later. Available for free.
  
''(details are needed here)''
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* Directly accesses the Protein Data Bank (PDB, with over 60 000 biomolecular structures) by keyword or by PDB ID.
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* Directly accesses the National Institutes of Health National Cancer Institute (NIH/NCI, with over 40 million structures) using a wide variety of chemical identifiers, including CAS registry numbers, InChI keys, trade names, common names, and IUPAC-format names.
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* Files from any other internet-available site that can be read by Jmol may also be loaded.
  
* see e.g. [[Videos]]
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The Jmol Molecular Visualization Activity is a nearly full touch-screen implementation of Jmol allowing for command-line entry of Jmol commands as well as a variety of preset simple visualization modes. Additional renderings include a full range of visualizations for crystals (unit cells, symmetry operators, Miller planes, for example), a wide variety of surfaces including Van der Waals surfaces, solvent-accessible surfaces, cavities, and molecular surfaces, and atomic and molecular orbitals.
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Special features of the Android version of Jmol include a connection to the gyroscope, allowing for initiating of spinning by simply moving the tablet in a natural fashion (see [[Videos]]).
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This activity is under active development. Feedback is much appreciated.
  
 
A collection of notes about possible support for Jmol under Android:
 
A collection of notes about possible support for Jmol under Android:
  
* [http://chemapps.stolaf.edu/jmol/docs/examples-12/new.htm Latest] Jmol prerelease has been prepared (but not yet tested; reports are welcome) to be able to run under Android. Since Android doesn't include the '''''Swing''''' Java class, the pop-up menu, the console and the <code>prompt</code> command used for asking for saving files from the signed applet '''will not work'''. But other functionality may work.
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* Since Android doesn't include the '''''Swing''''' Java class, the pop-up menu, the console and the <code>prompt</code> command used for asking for saving files from the signed applet '''will not work'''. But other functionality may work.
 
 
* [http://www.alwaysonpc.com AlwaysOnPC] ($20) gives you over 40 apps you can use from your Android device. For example, browse with Google Chrome or Firefox with Java support.
 
  
 
* [http://sourceforge.net/tracker/index.php?func=detail&aid=3128416&group_id=23629&atid=379136 Jmol feature request #3128416] with some discussion.
 
* [http://sourceforge.net/tracker/index.php?func=detail&aid=3128416&group_id=23629&atid=379136 Jmol feature request #3128416] with some discussion.

Revision as of 14:59, 5 December 2011

Android Operating System (smartphones and tablets)

Jmol 12.3 is available in a special version for running in tablets under the Android operating system: Jmol Molecular Visualization Activity, version 1.1, requires Android 2.2 or later. Available for free.

  • Directly accesses the Protein Data Bank (PDB, with over 60 000 biomolecular structures) by keyword or by PDB ID.
  • Directly accesses the National Institutes of Health National Cancer Institute (NIH/NCI, with over 40 million structures) using a wide variety of chemical identifiers, including CAS registry numbers, InChI keys, trade names, common names, and IUPAC-format names.
  • Files from any other internet-available site that can be read by Jmol may also be loaded.

The Jmol Molecular Visualization Activity is a nearly full touch-screen implementation of Jmol allowing for command-line entry of Jmol commands as well as a variety of preset simple visualization modes. Additional renderings include a full range of visualizations for crystals (unit cells, symmetry operators, Miller planes, for example), a wide variety of surfaces including Van der Waals surfaces, solvent-accessible surfaces, cavities, and molecular surfaces, and atomic and molecular orbitals.

Special features of the Android version of Jmol include a connection to the gyroscope, allowing for initiating of spinning by simply moving the tablet in a natural fashion (see Videos).

This activity is under active development. Feedback is much appreciated.

A collection of notes about possible support for Jmol under Android:

  • Since Android doesn't include the Swing Java class, the pop-up menu, the console and the prompt command used for asking for saving files from the signed applet will not work. But other functionality may work.