SimpleBio.mnu
Revision as of 20:05, 12 November 2014 by AngelHerraez (talk | contribs) (updating popup menu features to 14.3)
# "simpleBio" popup menu for Jmol, devised for first-time users and simple models
# e.g. Secondary School students of biomolecules --Biomodel-3--
# based on Jmol.mnu Jmol version 11.6.13 2008-11-24 13:39 en_US
# updated for 14.3.3_2014.08.01 2014-08-01 07:38
# Only changed entries are set here.
# Made by Angel Herráez, 2009-01-11; update 2014-11-12
# You are welcome to use this menu or any modification of it as you please.
# Part I -- Menu Structure
# ------------------------
@COLORSCHEME = cpk amino#PDB chain#PDB group#PDB shapely#PDB structure#PDB
popupMenu = renderMenu colorMenu spinMenu selectMenuText - advancedMenu aboutMenu
selectMenuText | Select ({0}) = hideNotSelectedCheckbox showSelectionsCheckbox - selectAll selectNone invertSelection - elementsComputedMenu - PDBproteinMenu PDBnucleicMenu PDBheteroMenu PDBcarboMenu PDBnoneOfTheAbove
PDBheteroMenu | Hetero = allHetero Water Ligand - PDBheteroComputedMenu
renderMenu | Style = renderCpkSpacefill renderBallAndStick renderSticks renderWireframe PDBrenderCartoonsOnly PDBrenderTraceOnly PDBstructureMenu - hbondMenu ssbondMenu - stereoMenu
colorMenu | Color = [color_atoms]Menu [color_bonds]Menu [color_hbonds]Menu [color_ssbonds]Menu - [color_backbone]PDBMenu [color_cartoon]PDBsMenu [color_ribbon]PDBsMenu [color_rockets]PDBMenu [color_strands]PDBMenu [color_trace]PDBMenu - [color_background]Menu
[color_atoms]Menu | Atoms = @COLORSCHEME - @COLOR - opaque translucent
[color_backbone]PDBMenu | Backbone = none - @COLORSCHEME - @COLOR - opaque translucent
[color_cartoon]PDBsMenu | Cartoon = none - @COLORSCHEME - @COLOR - opaque translucent
[color_ribbon]PDBsMenu | Ribbons = none - @COLORSCHEME - @COLOR - opaque translucent
[color_rockets]PDBMenu | Rockets = none - @COLORSCHEME - @COLOR - opaque translucent
[color_strands]PDBMenu | Strands = none - @COLORSCHEME - @COLOR - opaque translucent
[color_trace]PDBMenu | Trace = none - @COLORSCHEME - @COLOR - opaque translucent
schemeMenu | By Scheme = cpk - amino#PDB chain#PDB group#PDB shapely#PDB structure#PDB
spinMenu | Spin = spinOn spinOff
advancedMenu | Advanced = choosePopupMenu languageComputedMenu showConsole
choosePopupMenu | Choose menu = defaultMnu
# Part II -- Key Definitions
# --------------------------
defaultMnu | Use full Jmol menu = load menu ""
# Part III -- Word Translations
# -----------------------------
