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Date Name Thumbnail Size User Description Versions
15:31, 25 April 2024 Ala 3D.pdf (file) 137 KB AngelHerraez one-page PDF with embedded 3D model of alanine, generated using IDTF exported from Jmol + U3D-Converter + PDF-XChange Editor 1
16:26, 23 April 2024 Jmol Extension 5 folders setup 3.png (file) 98 KB AngelHerraez files and folders to be installed for the Extension to work 1
19:10, 22 April 2024 Jmol Extension 5 folders setup 2.jpg (file) 11 KB AngelHerraez   1
19:45, 10 February 2023 OPM renderings.png (file) 129 KB AngelHerraez Original rendering of a membrane protein in the OPM server (using dummy atoms) vs. an alternative (using Jmol drawn surfaces) 1
12:49, 31 January 2023 Jmolsocket.zip (file) 3 KB GWhitwell jmolsocket.py - library to provide Jmol access via sockets 3 classes Jmol - run Jmol in subprocess socketeer - socket communication for Jmol sndrcv - socket communication for 2 python script function demo() - shows how to use Jmol() and socketeer() for... 1
16:40, 14 August 2022 ConvertJmolApplets.zip (file) 1 KB AngelHerraez One more update: accepts load, script or both in both applet and button. 4
14:24, 7 March 2022 Oss-sf-favorite-black.png (file) 16 KB AngelHerraez SourceForge badge 1
14:24, 7 March 2022 Oss-open-source-excellence-black.png (file) 13 KB AngelHerraez SourceForge badge 1
14:24, 7 March 2022 Oss-community-leader-black.png (file) 15 KB AngelHerraez SourceForge badge 1
14:22, 7 March 2022 Oss-community-choice-black.png (file) 17 KB AngelHerraez SourceForge badge 1
18:28, 21 January 2022 Unicode triangle arrows.png (file) 4 KB AngelHerraez Aspect of some Unicode characters, for testing. Left: in page text. Right: using "echo" in Jmol (Win10, either Firefox or Chrome) 1
18:41, 17 December 2020 Local file error.png (file) 137 KB AngelHerraez two examples of errors thrown by browser when trying to access local files 1
18:35, 1 July 2020 Shiny-rendering-spacefill.png (file)
Error creating thumbnail: File missing
106 KB AngelHerraez A comparison between default lighting and a custom "shiny" style, ilustrated on a spacefill model. Colored by chain. Adapted from an image and script by Eric Martz. 1
18:23, 28 December 2019 CheckboxGroup partial selection-2.png (file) 12 KB AngelHerraez adding Edge legend. 1
18:21, 28 December 2019 CheckboxGroup partial selection.png (file) 12 KB AngelHerraez adding Edge legend 2
11:20, 29 October 2019 JSME toolbar.png (file) 24 KB AngelHerraez Snapshot of JSME top toolbar, default and after several options are enabled 1
10:46, 18 September 2019 Fast, fancy, shiny ball-and-stick.png (file) 35 KB AngelHerraez different renderings for ball and stick 1
10:38, 18 September 2019 Fast, fancy, shiny.png (file) 75 KB AngelHerraez different renderings for ribbons 1
15:59, 2 September 2019 Cys 3D.pdf (file) 73 KB AngelHerraez a pdf document with some text and a 3D interactive model of cysteine, for demo purposes 1
10:04, 17 August 2019 Jmol icon 13.ico.zip (file) 13 KB AngelHerraez Windows icon file with Jmol logo 1
23:07, 27 March 2019 Cyclohexane chair.png (file) 34 KB AngelHerraez a snapshot 1
16:16, 25 October 2018 Moodle Filter.png (file) 93 KB AngelHerraez an example of the Moodle Filter for Jmol (Moodle v.3.5.2, Jmol Filter v.6.1) See https://moodle.org/plugins/pluginversion.php?id=10261 1
15:57, 15 September 2018 ExportToWeb opening 75.png (file) 79 KB AngelHerraez smaller size 1
15:55, 15 September 2018 ExportToWeb window 75.png (file) 102 KB AngelHerraez sharper 2
18:47, 30 November 2017 AHemail.png (file) 1 KB AngelHerraez Angel's email address as an image 1
13:38, 12 October 2016 Ala rock.gif (file) 248 KB AngelHerraez 20 degrees rocking motion of an alanine model, animated GIF made using Jmol script: spinFPS = 10; capture transparent "Ala_spin.gif" rock Y 20; CC-zero Licence, public domain CC0 1.0 Universal, https://creativecommons.org/publicdomain/zero/1.0/ 1
13:36, 12 October 2016 Ala spin.gif (file) 341 KB AngelHerraez 360 degrees continuous spinning of an alanine model, animated GIF made using Jmol script: spinFPS = 5; capture transparent "Ala_spin.gif" spin Y; CC-zero Licence, public domain CC0 1.0 Universal, https://creativecommons.org/publicdomain/zero/1.0/ 1
18:41, 2 September 2016 Menu redesign 4.png (file) 63 KB AngelHerraez snapshots of popup menu as it appears in Jmol 14.6.2 1
14:51, 11 July 2016 Caffeine rotating bananas 200px.gif (file) 875 KB AngelHerraez rotating image of caffeine displaying double bonds as "bananas" 1
11:37, 14 May 2016 Menu redesign 3.png (file) 101 KB AngelHerraez proposal #3 for repositioning elements in the popup menu 1
09:59, 11 May 2016 Menu redesign 2.png (file) 138 KB AngelHerraez smaller size 75% 2
09:58, 11 May 2016 Menu redesign 1.png (file) 83 KB AngelHerraez smaller size 75% 2
09:58, 4 May 2016 File set minimal.png (file) 7 KB AngelHerraez display of minimal set of files required for JSmol operation 1
11:33, 20 February 2016 Play make live.jpg (file) 992 bytes AngelHerraez make it small for easier insertion 2
16:29, 24 January 2016 JSmol spinner.gif (file) 31 KB AngelHerraez A standard animated spinner (rotating gray bar) with the JSmol logo superimposed. Creative Commons CC0 1.0 Universal, Public Domain Dedication 1
15:42, 3 March 2015 Lightweight JSmol shadeAtoms.png (file) 35 KB AngelHerraez illustration of the "shadeAtoms" parameter of Lightweight JSmol (a.k.a. getTMApplet) Fructose-2,6-bisphosphate from PubChem, light yellow background #FFFFE9 1
23:09, 30 July 2014 Jsmol-vs-browsers.png (file) 59 KB EricMartz   1
14:20, 9 October 2013 ExportToWeb opening.png (file) 54 KB AngelHerraez screenshot - how to open the Expot to Web module from top menubar or from toolbar 1
14:13, 9 October 2013 ExportToWeb window.jpg (file) 84 KB AngelHerraez screenshot - Jmol Export to Web application window As of Jmol 13.0.14 1
14:11, 9 October 2013 ExportToWeb window.png (file) 62 KB AngelHerraez screenshot - Export to Web application window as of Jmol 13.0.14 1
21:49, 14 May 2013 JSmol fatto-con 13.png (file) 32 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:49, 14 May 2013 JSmol fait-avec 13.png (file) 32 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:49, 14 May 2013 JSmol hecho-con 13.png (file) 32 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:48, 14 May 2013 JSmol made-with 13.png (file) 32 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:48, 14 May 2013 Jmol fatto-con 13.png (file) 27 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:48, 14 May 2013 Jmol fait-avec 13.png (file) 27 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:48, 14 May 2013 Jmol hecho-con 13.png (file) 27 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
21:47, 14 May 2013 Jmol made-with 13.png (file) 27 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
19:32, 14 May 2013 Jmol icon13.png (file) 18 KB AngelHerraez New logo+icon set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
19:29, 14 May 2013 JSmol logo13.png (file) 29 KB AngelHerraez New logo set for Jmol and JSmol. Made by Angel Herráez, no copyright, licence Creative Commons Zero (CC0). See http://biomodel.uah.es/Jmol/logos/ 1
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