Difference between revisions of "Colors"
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Jmol + JSmol Documentation
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=== Default colors used by Jmol === | === Default colors used by Jmol === | ||
| − | + | [http://jmol.sourceforge.net/jscolors/ Documentation on colors in Jmol]. | |
| − | + | ==== Support for isotopes ==== | |
| − | |||
| − | + | Common isotopes are recognized by Jmol and colored slightly lighter or darker than the element color: | |
| − | + | ||
| − | + | {| | |
| − | + | |- | |
| − | + | ! isotope !! color !! color code !! script syntax !! proposed color | |
| − | + | |- | |
| + | |'''<sup>1</sup>H''' | ||
| + | ||<div style="background-color:#FFFFFF;width:50px;border:1px solid gray;"> </div> | ||
| + | || [xFFFFFF] || _1H | ||
| + | |- | ||
| + | |<sup>2</sup>H | ||
| + | ||<div style="background-color:#FFFFC0;width:50px;"> </div> | ||
| + | || [xFFFFC0] || _2H, _D, deuterium | ||
| + | |- | ||
| + | |<sup>3</sup>H | ||
| + | ||<div style="background-color:#FFFFA0;width:50px;"> </div> | ||
| + | || [xFFFFA0] || _3H, _T, tritium | ||
| + | |- | ||
| + | |<sup>11</sup>C | ||
| + | ||<div style="background-color:#D8D8D8;width:50px;"> </div> | ||
| + | || [xD8D8D8] || _11C | ||
| + | ||<div style="background-color:#C0C0C0;width:50px;">new</div> | ||
| + | |- | ||
| + | |'''<sup>12</sup>C''' | ||
| + | ||<div style="background-color:#909090;width:50px;"> </div> | ||
| + | || [x909090] || _12C | ||
| + | ||<div style="background-color:#909090;width:50px;">same</div> | ||
| + | |- | ||
| + | |<sup>13</sup>C | ||
| + | ||<div style="background-color:#505050;width:50px;"> </div> | ||
| + | || [x505050] || _13C | ||
| + | ||<div style="background-color:#686868;width:50px;color:white;">new</div> | ||
| + | |- | ||
| + | |<sup>14</sup>C | ||
| + | ||<div style="background-color:#404040;width:50px;"> </div> | ||
| + | || [x404040] || _14C | ||
| + | ||<div style="background-color:#404040;width:50px;color:white;">same</div> | ||
| + | |- | ||
| + | |'''<sup>14</sup>N''' | ||
| + | ||<div style="background-color:#3050F8;width:50px;"> </div> | ||
| + | || [x3050F8] || _14N | ||
| + | ||<div style="background-color:#3050F8;width:50px;color:white;">same</div> | ||
| + | |- | ||
| + | |<sup>15</sup>N | ||
| + | ||<div style="background-color:#105050;width:50px;"> </div> | ||
| + | || [x105050] || _15N | ||
| + | ||<div style="background-color:#2137AA;width:50px;color:white;">new</div> | ||
| + | |} | ||
Latest revision as of 16:47, 10 August 2021
- Description of files in Jmol+JSmol distribution
- File formats read or written by Jmol
- The Jmol scripting interface
- Scripting as a programming language
- Complete reference of scripting commands:
- Loading models directly from databases
- Mouse manual
- Default colors used by Jmol
- Atom sets predefined in Jmol
- Support for bond orders · isotopes · stereochemistry · hydrogen bonds
- Jmol as editor
- Multi-touch support
- Copying and pasting state scripts between applets.
- Backward compatibility (changes of behavior across versions)
- Features added since version 10
- Users mailing list (and a mirror)
Default colors used by Jmol
Documentation on colors in Jmol.
Support for isotopes
Common isotopes are recognized by Jmol and colored slightly lighter or darker than the element color:
| isotope | color | color code | script syntax | proposed color |
|---|---|---|---|---|
| 1H | [xFFFFFF] | _1H | ||
| 2H | [xFFFFC0] | _2H, _D, deuterium | ||
| 3H | [xFFFFA0] | _3H, _T, tritium | ||
| 11C | [xD8D8D8] | _11C | new
| |
| 12C | [x909090] | _12C | same
| |
| 13C | [x505050] | _13C | new
| |
| 14C | [x404040] | _14C | same
| |
| 14N | [x3050F8] | _14N | same
| |
| 15N | [x105050] | _15N | new
|
