Difference between revisions of "Wikis Using Jmol"
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Jmol / JSmol Applications
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{{Jmol_Applications_Sections}} | {{Jmol_Applications_Sections}} | ||
| − | Jmol can be embedded in | + | Jmol can be [[Jmol in Wikis | embedded in wiki pages]] using special '''processors'''. |
If you know a Wiki which uses Jmol, and which is not in the list below, please add it. | If you know a Wiki which uses Jmol, and which is not in the list below, please add it. | ||
* [http://wiki.jmol.org The Jmol wiki] | * [http://wiki.jmol.org The Jmol wiki] | ||
| − | * [http:// | + | * [http://ecoliwiki.net EcoliWiki] |
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* [http://www.ch.ic.ac.uk/wiki/index.php/Second_Year_Modelling_Workshop Imperial College London] introductory molecular mechanics modelling course (uses [[MediaWiki]]). | * [http://www.ch.ic.ac.uk/wiki/index.php/Second_Year_Modelling_Workshop Imperial College London] introductory molecular mechanics modelling course (uses [[MediaWiki]]). | ||
| − | * [ | + | * [https://wiki.ch.ic.ac.uk/wiki/index.php?title=Main_Page#Third_Year_Computational_Chemistry_Lab Imperial College London] Advanced molecular modelling course (uses [[MediaWiki]]). |
* [http://www.pdbwiki.org PDBwiki] - PDB community annotation | * [http://www.pdbwiki.org PDBwiki] - PDB community annotation | ||
| − | * [http://proteopedia.org/wiki/ Proteopedia] - a collaborative, 3D encyclopedia of proteins and other molecules. Based on MediaWiki and its Jmol Extension. Uses a simple custom tag for embedding JmolApplet instances. | + | * [http://proteopedia.org/wiki/ Proteopedia] - a collaborative, 3D encyclopedia of proteins and other molecules. Based on MediaWiki and its Jmol Extension. Uses a simple custom tag for embedding JmolApplet instances. Contains a page for every entry in the PDB (>50,000 pages), with a Jmol view that highlights functional sites and ligands. Offers an easy-to-use scene-authoring tool so you don't have to learn Jmol script language to create customized molecular scenes. Custom scenes are easily attached to "green links" in descriptive text that display those scenes in Jmol. |
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* [http://www.sklogwiki.org/ SklogWiki] - a wiki for thermodynamics, statistical mechanics, and the computer simulation of materials. | * [http://www.sklogwiki.org/ SklogWiki] - a wiki for thermodynamics, statistical mechanics, and the computer simulation of materials. | ||
| − | * [http:// | + | * [http://organicreactions.org OrganicReactions.org] - the ''Organic Reactions'' wiki |
Latest revision as of 20:31, 10 March 2019
- Websites Using J(S)mol
- J(S)mol in the Classroom
- Journals Using J(S)mol
- J(S)mol Literature
- Articles Using J(S)mol
- Books Using J(S)mol
- Wikis Using J(S)mol
- Blogs Using J(S)mol
- CMS Using J(S)mol (Moodle and others)
Course Management Systems, Learning Management Systems, Virtual Learning Environments, e-Learning Platforms - Applications Embedding Jmol
- Distributions Including Jmol
- Blue Obelisk
Jmol can be embedded in wiki pages using special processors.
If you know a Wiki which uses Jmol, and which is not in the list below, please add it.
- The Jmol wiki
- EcoliWiki
- Imperial College London introductory molecular mechanics modelling course (uses MediaWiki).
- Imperial College London Advanced molecular modelling course (uses MediaWiki).
- PDBwiki - PDB community annotation
- Proteopedia - a collaborative, 3D encyclopedia of proteins and other molecules. Based on MediaWiki and its Jmol Extension. Uses a simple custom tag for embedding JmolApplet instances. Contains a page for every entry in the PDB (>50,000 pages), with a Jmol view that highlights functional sites and ligands. Offers an easy-to-use scene-authoring tool so you don't have to learn Jmol script language to create customized molecular scenes. Custom scenes are easily attached to "green links" in descriptive text that display those scenes in Jmol.
- SklogWiki - a wiki for thermodynamics, statistical mechanics, and the computer simulation of materials.
- OrganicReactions.org - the Organic Reactions wiki
