Difference between revisions of "Wikis Using Jmol"
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Jmol / JSmol Applications
AngelHerraez (talk | contribs) (Proteopedia) |
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* [http://chemie.skku.ac.kr/wiki/wiki.php/JmolPlugin MoniWiki] | * [http://chemie.skku.ac.kr/wiki/wiki.php/JmolPlugin MoniWiki] | ||
* [http://www.pdbwiki.org PDBwiki] - PDB community annotation | * [http://www.pdbwiki.org PDBwiki] - PDB community annotation | ||
| − | * [http://proteopedia.org/wiki/ Proteopedia] - a collaborative, 3D encyclopedia of proteins and other molecules. Based on MediaWiki and its Jmol Extension. Uses a simple custom tag for embedding JmolApplet instances. | + | * [http://proteopedia.org/wiki/ Proteopedia] - a collaborative, 3D encyclopedia of proteins and other molecules. Based on MediaWiki and its Jmol Extension. Uses a simple custom tag for embedding JmolApplet instances. Contains a page for every entry in the PDB (>50,000 pages), with a Jmol view that highlights functional sites and ligands. Offers an easy-to-use scene-authoring tool so you don't have to learn Jmol script language to create customized molecular scenes. Custom scenes are easily attached to "green links" in descriptive text that display those scenes in Jmol. |
* [http://qed.princeton.edu QED Service] at [http://www.princeton.edu Princeton University] | * [http://qed.princeton.edu QED Service] at [http://www.princeton.edu Princeton University] | ||
* [http://www.sklogwiki.org/ SklogWiki] - a wiki for thermodynamics, statistical mechanics, and the computer simulation of materials. | * [http://www.sklogwiki.org/ SklogWiki] - a wiki for thermodynamics, statistical mechanics, and the computer simulation of materials. | ||
* [http://www.shef.ac.uk/chemistry/uniwakka/ UniWakka] Jmol demo at University of Sheffield. [http://uniwakka.sf.net/ UniWakka Home]. | * [http://www.shef.ac.uk/chemistry/uniwakka/ UniWakka] Jmol demo at University of Sheffield. [http://uniwakka.sf.net/ UniWakka Home]. | ||
Revision as of 22:28, 24 April 2008
- Websites Using J(S)mol
- J(S)mol in the Classroom
- Journals Using J(S)mol
- J(S)mol Literature
- Articles Using J(S)mol
- Books Using J(S)mol
- Wikis Using J(S)mol
- Blogs Using J(S)mol
- CMS Using J(S)mol (Moodle and others)
Course Management Systems, Learning Management Systems, Virtual Learning Environments, e-Learning Platforms - Applications Embedding Jmol
- Distributions Including Jmol
- Blue Obelisk
Jmol can be embedded in Wiki pages using special Processors. Such a processor is available for MediaWiki, MoniWiki (see Jmol Processor).
If you know a Wiki which uses Jmol, and which is not in the list below, please add it.
- The Jmol wiki
- BioWiki (based on DokuWiki)
- Computational Chemistry Wiki
- DokuWiki and its Jmol plugin page
- Folding Wiki, dedicated Wiki for Folding@Home.
- Imperial College London introductory molecular mechanics modelling course (uses MediaWiki).
- MoniWiki
- PDBwiki - PDB community annotation
- Proteopedia - a collaborative, 3D encyclopedia of proteins and other molecules. Based on MediaWiki and its Jmol Extension. Uses a simple custom tag for embedding JmolApplet instances. Contains a page for every entry in the PDB (>50,000 pages), with a Jmol view that highlights functional sites and ligands. Offers an easy-to-use scene-authoring tool so you don't have to learn Jmol script language to create customized molecular scenes. Custom scenes are easily attached to "green links" in descriptive text that display those scenes in Jmol.
- QED Service at Princeton University
- SklogWiki - a wiki for thermodynamics, statistical mechanics, and the computer simulation of materials.
- UniWakka Jmol demo at University of Sheffield. UniWakka Home.
