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Jmol is a Java molecular viewer for three-dimensional chemical structures. Features include reading a variety of file types and output from quantum chemistry programs, and animation of multi-frame files and computed normal modes from quantum programs.

This is a start for the Jmol Community Wiki. On that page the Jmol user community can discuss everything that has to do with Jmol. Browse around in the page, and feel free to add new pages, extra information, comments, questions, links to useful Jmol Macro's, or whatever else you think is relevant.

Please post any and all comments in the Discussion Page (see on the top of the page) about how we can best organize this forum. Your contributions to the Jmol community are greatly appreciated! (Timothy Driscoll)

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Pages on this Wiki

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Jmol / JSmol Applications Websites Using J(S)mol J(S)mol in the Classroom Journals Using J(S)mol J(S)mol Literature Articles Using J(S)mol Books Using J(S)mol Wikis Using J(S)mol Blogs Using J(S)mol CMS Using J(S)mol (Moodle and others) Course Management Systems, Learning Management Systems, Virtual Learning Environments, e-Learning Platforms Applications Embedding Jmol Distributions Including Jmol Blue Obelisk	Template:Main Page/Running Jmol Template:Main Page/Tutorials	Jmol + JSmol Documentation Description of files in Jmol+JSmol distribution File formats read or written by Jmol The Jmol scripting interface Scripting as a programming language Complete reference of scripting commands: at St Olaf (primary site) at Jena3D (mirror) Loading models directly from databases Mouse manual Default colors used by Jmol Atom sets predefined in Jmol Support for bond orders · isotopes · stereochemistry · hydrogen bonds Jmol as editor Multi-touch support Copying and pasting state scripts between applets. Backward compatibility (changes of behavior across versions) Features added since version 10 Users mailing list (and a mirror)

Contributors

AngelHerraez, NicolasVervelle, Pimpim, EricMartz, Hansonr, JmolTest